Training, Competition and Genetics

InjuryRiskKK.jpg

The regular demands of training and competition make professional, collegiate, and recreational athletes highly susceptible to injury.

Genetics have a large influence over strength, muscle size and muscle fiber composition (fast or slow twitch), anaerobic threshold (AT), lung capacity, flexibility, power and endurance.

Injury is a fact of life for most athletes, but some professionals—and some weekend warriors —just seem more injury-prone than others. But what is it about their bodies that makes the bones, tendons, and ligaments so much more likely to tear or strain—bad luck, or just poor preparation?

A growing body of research suggests another answer: that genetic makeup may play an important role in injury risk.

Recreational distance running causes high numbers of injuries, with incidence rates estimated between 30% and 75% per person per year.

Treatment of sports injuries costs at least $160 billion per year in the U.S. and Major League Baseball lost $1.6 billion in payroll between 2008 and 2013 because of injuries to players. Avoiding injuries and remaining healthy is key to the success of a team or an individual athlete.

The potential to use genetic testing to reduce sports injuries

 

COL1A1

The COL1A1 gene, for example, encodes the alpha chain of type I collagen, the major protein component of all tendons and ligaments.  It’s associated with vasodilation, blood pressure control, efficiency of muscular contraction and cell hydration.

The GT alleles have a moderately raised risk of tendon and ligament injuries in sport. They need to undertake pre-habilitative exercises relevant to the sports they participate in and consider nutritional support for connective tissue.  They will have reduced response to endurance training and should make sure they stay sufficiently hydrated during endurance activities.

The GG will have an increased risk for tendon and ligament injuries and ruptures and or shoulder dislocations especially related to sports participation. They should also undertake pre-habilitative exercises relevant to the sports they participate in and consider nutritional support for connective tissue. They will have reduced response to endurance training and should make sure they stay sufficiently hydrated during endurance activities.

The TT variants contribute to positive response to endurance training.  They are positive for increased muscle efficiency especially in conjunction with ACE I-allele.  The T allele leads to increased expression of type I collagen alpha polypeptides compared with the G nucleotide, which may increase the tensile strength of tendons and ligaments. About 4% of athletes carry 2 copies of the T allele.

(90% of people who have brittle bone disease have mutations in COL1A1 and COL1A2.  I’m sure these folks would have liked to know early on so they could have taken preventive measures.)

Besides polymorphisms in COL1A1, there are additional DNA variants associated not only with ACL rupture and Achilles tendinopathy but also with other athletic injuries (shoulder dislocations and muscle strain severity).  It is important to note here that there are antibiotics that can flox genes and cause serious injuries, ruptures of the Achilles tendons and other tendons and even disability.  To learn more about fluoroquinolones like Cipro and Levaquin click here.  (Pharmacogenetic screenings can identify contraindication with prescription medications.)

The gene COL5A1 encodes the protein collagen alpha-1(V) chain. It is a minor connective tissue component but of ubiquitous distribution.  Type V collagen binds to DNA, heparin sulfate, thrombospondin, heparin, and insulin.  Defects in COL5A1 are a cause of Ehlers-Danlos syndrome (EDS1).

GDF5

A functional skeletal system requires the coordinated development of many different tissue types, including cartilage, bones, joints, and tendons. Members of the Bone morphogenetic protein (BMP) family of secreted signaling molecules have been implicated as endogenous regulators of skeletal development. This is based on their expression during bone and joint formation, their ability to induce ectopic bone and cartilage, and the skeletal abnormalities present in animals with mutations in BMP family members. One member of this family, Growth/differentiation factor 5 (GDF5).

IL6

 

IL-6 mutations can be involved with other mutations like CRP and TNF in autoimmune disorders like Epstein Barr if the athlete has the mutation and is overtraining.

IL-6R is associated with immune response and cell growth. Dysregulated production of IL6 and this receptor are implicated in the pathogenesis of many diseases, such as multiple myeloma, autoimmune diseases and prostate cancer.

CRP

C-Reactive protein (CRP) is associated with acute phase protein and rises in response to inflammation in the body.  Elevation in CRP concentration will aid in determining the severity of acute tissue injury.

TNF

The genetic variant Tumor Necrosis Factor (TNF) causes over-inflammation. There is data suggesting that TNF may exacerbate neurobehavioral deficits and tissue damage.  If an athlete is over-training it could be involved in autoimmune disease.

Acute traumatic joint injury increases the risk of developing osteoarthritis.  Elevated levels of TNF and IL-6 have been detected in joint injuries.

There are separate studies concerning genetic polymorphisms associated with athletic performance, such as muscle contractility and V̇O2 max. Genetic information of this sort has recently been used to prevent injuries and maximize athletic performance. A professional soccer team in the English Premier League, for example, tested athletes for genetic loci associated with sports performance, and the English Institute of Sport expressed interest in providing genetic testing to Britain’s Olympic athletes in 2012.

The future holds promise for everyone. Someone with limited genetic potential can find ways to compensate and become a solid performer and athletes who are lucky to have exceptional genetics can optimize them.

Trainers and professionals can use this information to help optimize their clients and patients.

I think this is the best genetic lifestyle screening on the market because of the genetic scientist behind it, Dr. Keith Grimaldi.  I know his integrity and ethics.  He will not put genes in his screening that haven’t been tested with 3 independent clinical placebo studies proving a change in genetic expression influenced by a change in lifestyle.

If you would like to integrate this screening into your practice to improve patient outcomes, I’d be happy to offer you a complementary proposal.  Contact me at Kathy@CriticalHealth.org or 617.515.7559.

If you would like to use this screening to develop an action plan for your own optimal health, I’d be happy to offer it to you with my complementary services for a review of results.  Contact me at Kathy@CriticalHealth.org or 617.515.7559.

 

Why Genetic Lifestyle Screening Can Make a Difference

General Timeline of Genetic Training in Sports

1966 – 1991 Y-chromosomal testing as part of official sex segregation.
2001 Policy of the International Association of Athletics Federations and of the International Olympic Committee, respectively.
2001 Professional Boxing and Martial Arts Board of Victoria considers compulsory genetic screening for APOE4 variant in boxers.
2003 World Anti-doping Agency prohibits methods of gene doping.
2005 Eighteen Australian male rugby players were tested and analyzed for 11 genes.

The Chicago Bulls attempt genetic testing of free agent, Eddy Curry, for the purpose of ruling out hypertrophic cardiomyopathy.

2009 23andMe analyzes DNA samples from 100 current and former NFL linemen.

Major League Baseball begins using genetic testing with prospective players from the Dominican Republic and other Latin American Countries.

2010 The National Collegiate Athletic Association implements mandatory sickle cell trait screening.
2011 An English Premier League soccer team analyzes players’ DNA samples at 100 genetic loci.

The National Football League screens for genetic conditions sickle cell trait and G6PD under the 2011 NFL collective bargaining agreement.

2012 2012 English Institute of Sport expresses interest in the integration of genetic technologies to “tailor the training, conditioning, and preparation” of Britain’s Olympic and Paralympic athletes.
2014 Two Barclay’s Premier League soccer teams commission tests of their players’ DNA for 45 variants.


http://bjsm.bmj.com/content/41/8/469.full.pdf
http://journals.lww.com/cjsportsmed/Abstract/2013/01000/Collagen_Genes_and_Exercise_Associated_Muscle.9.aspx

http://www.theatlantic.com/health/archive/2015/02/the-genetics-of-being-injury-prone/385257/

http://www.sciencedirect.com/science/article/pii/S000292970760127X

http://ghr.nlm.nih.gov/gene/COL1A1

https://www.geneticliteracyproject.org/2015/01/08/can-we-yet-use-genetics-to-determine-which-sports-are-best-for-our-kids/

http://sportsmedicine.about.com/od/anatomyandphysiology/a/genetics.htm

http://www.ncbi.nlm.nih.gov/pubmed/22750484

http://www.sciencedirect.com/science/article/pii/S0012160699992412

http://www.ncbi.nlm.nih.gov/pubmed/8959256

http://www.ncbi.nlm.nih.gov/pubmed/23611870

http://www.ors.org/Transactions/55/1056.pdf


Fluoroquinolones and What Might Help

Six years ago I dated a man who worked for a pharmaceutical company.  I only went on two dates with him but I remember he was a runner and he was complaining about digestive problems that he had been having for three years after taking one of his company’s antibiotics, Levaquin.  He said while he was taking it he was out running and could feel something strange happening to his heals.

He stopped running and called a nurse at his company and asked her to look up side effects.  She told him, “Stop running right now. One of the side effects is spontaneous rupture of the Achilles Tendon.”

I warned PTs that I work with and they all responded that they’d already treated multiple patients with the Achilles tendon issue related to the antibiotic.

Three years ago I was hospitalized with an infection.  The night I went to the emergency room I had a white cell count in the fatal area.  The reason all patients need an advocate when they are in the hospital is that the patient can’t be expected to advocate for themselves when they are literally “dying.”

Cipro and Levaquin saved my life.  However, I have MTHFR (and other genetic polymorphisms that are listed in pharmacogenetics screenings as contraindicated with some pharmaceuticals). I have had infections a number of times (a symptom of MTHFR) and was treated with antibiotics that did not have the serious side effects of fluoroquinolones.

I was treated with FQs in March, 2013.  The first side effect I noticed was blurry eyes.  I was 64 and had not needed glasses previously.  When I saw an eye doctor she told me that the cocktail of fluoroquinolones I was given causes eye damage.  Blurry vision and trouble switching from close up to distance is what I’ve noticed.  Studies in Pubmed indicate fluoroquinolones inhibit corneal cell growth and repair.  (Ironically, they are in eye drops.)

I may have also received them after my daughter’s birth when I became septic in 1988.  Shortly after that I started having tendon problems in my wrists, shoulder and ankle.  I didn’t connect those to my treatment.

Some people are saying they experience a cycle of pain.  I’ve noticed 3-4 months I have pain for up to 3 days, then it mostly stops except for the gluteal tendon which has been constant.  I’ve literally had a pain in the ass for years. (I’m 67 years old.) People who experience the cycles of pain are calling it floxing.

Some people say they are in pain all the time.  There is a documentary about fluoroquinolones here.

Icing affected tendons helps me. I’ve noticed tendons and ligaments that experience repetitive use or have been damaged previously might be affected more by side effects. Hormones like Cortisol and lack of sleep might increase side effects.

Microcore ice packs have helped me.

I put them in a pad called Better Back to sit on to numb the discomfort from gluteal tendinopathy.  I use a bandage to wrap them around my wrists and ankles.

There is a support group on FB and www.floxiehope.com

There is a note by an MD to give your MD at the bottom of this blog along with the links I have found inside PubMed.  (Double Blind, Clinical studies on fluoroquinolones.)

What might help?

 Avoid all fluoroquinolones in the future. Be tested for genetic contraindications.

Polytrim can be substituted for antibacterial eye drops.        

BluTek lenses in glasses to deflect further damage to eyes from digital blue light.

My eye doctor told me my eyesight would not improve.  However my eyes did improve with patented lutein, zeaxanthin, astaxanthin, pycnogenol, resveratrol and other antioxidants including OPCs and Omega III fish oils. If I stop taking the protocol, they worsen.  I have since found clinical studies in PubMed indicating resveratrol protects the endothelial cells of the cornea.  I had been taking resveratrol for over a decade so it may have had some protective effect.

When working with health professionals ask if they know about MTHFR, genetic lifestyle screenings

and pharmacogenetics screenings.  Find the ones who know.

Eat a lot of green leafy vegetables (organic if possible).  Fluoroquinolones cause mitochondrial damage.  Dr. Terry Wahls did a TED Talk called Mind Your Mitochondria.   She talks about how she cured herself from MS, a disease that impacts mitochondria.

INDUSTRIALIZED FOOD

 For years I’ve heard health professionals and experts say food alone is all that is necessary for health.  That might have been true decades ago but it is not true now.

Industrialized farming and food practices in the US as of 2015 leave soils severely depleted of minerals – more than 85%.

Food is harvested much too soon for full maturation of the plant therefore it will be lacking in nutrients and enzymes.  Have you noticed fruits or vegetables that are hard as rocks in the grocery store?

You can watch a presentation I did for doctors on the topic here, GMO, glyphosate and surfactants, BT toxin.

You would have to eat an excess of 12 servings of organic vegetables per day to get the minimum nutrients if you have no health issues.

The MDs and other health professionals I work with who pay attention to environment and epigenetics say the environment is much more toxic now.

They say it is nearly impossible to get the nutrients you need from food in the US if you have no health conditions.

Fluoroquinolones deplete iron (and other minerals as well as magnesium, calcium and antioxidants).  Iron is already depleted in food.  The two diagrams below only go to the late 1990s.

Apples_environment

 

Mineral_Depletion

 

FQ_NutrientDepletion

 

Humans can’t make some essential nutrients.  If you can’t make them and you can’t get them from your food, and they are depleted by prescriptions, you need to supplement.  Nutrients need co-factors and enzymes and other nutrients.  Working with an expert who knows about this and ingredients that are patented and bioavailable will help.

Depending on severity of symptoms, digestive issues, etc. IV or Isotonic  antioxidants including OPCs (cross the blood brain barrier) and Glutathione, magnesium, calcium, iron, vitamin D, activated B-Complex with 5-MTHF (Quadrafolic), amino acids for collagen synthesis and repair of tendons can be put into a custom cocktail.

I bolded nutrients mentioned in clinical studies as being depleted.

Bromelain is the enemy of protein and cytokines are proteins that may be created in excess related to inflammation.  Genetic Polymorphisms like TNF and IL6 may put that person at risk for over-inflammation.

I have found digestive enzymes, probiotics and pharmaceutical grade aloe juice might heal the gut and address the depletion of good bacteria.

(Commercial brands of aloe that are carried in stores like Whole Foods are mostly water and are not pharmaceutical grade. A good aloe should say 150% concentrated aloe, should have the more toxic part of the plants removed and should have the Aloe Association Seal.)

*AVOID ALL SYNTHETIC FOLIC ACID if you have MTHFR polymorphism.

Why Intermittent Fasting May Help Pain and Fatigue

Learn more about Intermittent Fasting here.

Some of you may balk at the idea of calorie restriction when dealing with chronic fatigue, but there’s actually compelling evidence showing it can play a significant role in correcting mitochondrial function. As noted earlier, when excessive electrons are produced in the mitochondria they create highly destructive free radicals. The best way to address this is to limit excessive electron production, as if there are fewer free electrons, they’re less likely to leak out.

So how do you limit free electrons?

One of the most effective ways to do this is through calorie restriction, which in fact is a proven method to increase lifespan in mammals. Resveratrol has also been shown to activate the SIRT1 gene which is the genetic mechanism that caloric restriction is activating.

The drawback of calorie restriction is that it is enormously difficult to maintain over extended periods of time. Fortunately, research has shown that intermittent fasting effectively mimics calorie restriction, and it’s far easier to comply with, especially if you do it daily, restricting your eating to a window of about six to eight hours, where your last meal is taken at least three hours before bedtime. Ideally, aim for as much as six hours between your last meal and your scheduled bedtime.

Note on Environment

 The U.S. is still addicted to fossil fuels.  The by-product of burning coal is methyl-mercury. It is in the air, water and ground.

Senator Whitehouse of R.I. said a whale that beaches on R.I. shores is considered toxic waste.  The cod industry in New England has collapsed.  The oyster industry in Mid-Atlantic has collapsed.

Pesticides are spread like water. Bees are dying.  No bees, no food.

This topic is another book but it impacts quality of food, air and water.

 *Synthetic folic acid UMFA (unmetabolized folic acid) is being associated with MTHFR polymorphism.  People with MTHFR, 50%+ of the population should avoid UMFA.  Linked to interfering with T cells (vulnerability to cancer) and neurological problems.  The only folate that does not mask a B-12 deficiency is 5-MTHF. (Quadrafolic) Synthetic folic acid is in most fortified foods as of 11/8/2015 in the U.S.

When looking at nutraceuticals, patented, science based protocols are advised.  The manufacturer has spent millions to prove the effectiveness of their product.  Many companies use the patented clinical studies but they do not have the patented ingredient.

Problems related to fluoroquinolones were reported as early as 1980s from Europe.

The Freedom of Information Act has obtained data showing more than 50,000 reported adverse reactions and 3,000 deaths.  We know that most doctors don’t report the side effects and because of the “constellation of symptoms” most patients don’t connect the dots so the figure for adverse side effects could be in the millions.

Examples of well known fluoroquinolones are Avelox, Cipro (Bayer), and Levaquin (Johnson and Johnson).  These are not the only ones.  You have to ask.

Letter for an MD by an MD:

Dear Doctor,

As you are probably aware, the fluoroquinolone class of antibiotics is useful for certain serious infections. Unfortunately, fluoroquinolones also have a long history of serious adverse drug reactions, many of them long term . (1) As a consequence of these reactions, several of these drugs have been removed from clinical practice or their use severely restricted. Besides the severe life threatening immediate reactions, those of a more chronic nature may occur.

The spectrum of these adverse reactions is extremely broad. Patients suffering from these reactions are often misdiagnosed, referred for a psychiatric consult or even unfairly labeled as “difficult patients.”

Many physicians have not been properly educated about the severe nature of these chronic adverse reactions, some of which result in life-long disabilities. Post-marketing studies of several flouroquinolones have shown an incidence of adverse reactions much higher than were originally reported in pre-clinical studies. (1,2,3)

You are probably aware that the fluoroquinolones are eukaryotic DNA gyrase and topoisomerase inhibitors very similar to many antineoplastic agents. Because of their similar mechanisms of action, it’s no surprise that fluoroquinolones and many antineoplastic agents share similar toxicity profiles. Studies have even been conducted using fluoroquinolones to inhibit neoplastic chondrocyte growth in chondrosarcoma. (4)

There are many patients who have a syndrome of associated symptoms that include, but are not limited to: CNS agitation, depression, insomnia, new-onset anxiety and panic attacks, and even elevated intracranial pressure and visual abnormalities. They may also present with peripheral neuropathy usually of the small fiber type with temperature and pain sensory aberrations, but also often involving larger sensory and motor nerves. Spontaneous muscle activity with fasciculations, myokymia and myoclonic jerks may also occur. Many have musculoskeletal damage with degeneration of cartilage and tendons often leading to tendon rupture and severe ongoing musculoskeletal pain long after therapy has been discontinued. (1,2,3,4,5,6,7,8)

This complex symptomatology does not usually resolve after discontinuation of the inducing fluoroquinolone and may in fact worsen. Many patients go on to have disability that may persist for years. (1) Unfortunately, such patients are often seen by many physicians from multiple specialties who, given the complex symptomatology, fail to recognize a unifying diagnosis.

The mechanism of injury is not fully apparent, but several studies have been conducted and researchers have implicated the following possible mechanisms:

  1. Inhibition or disruption of the CNS GABA receptor. (9)
  2. Depletion of magnesium and disruption of cellular enzymatic function. (10)
  3. Disruption of mitochondrial function and energy production. (11,12)
  4. Oxidative injury and cellular death. (14)

This seems to be a functional disorder and structural abnormalities are not usually seen on radiological studies. (13) Patients may have abnormal EMG/NCV studies, abnormal skin punch neurologic density and morphology, abnormal vasomotor and sudomotor function on autonomic testing, and abnormal degeneration of tendons and cartilage on MRI. (13)

There may be a large number of these patients with coexisting endocrine abnormalities including: antithyroid antibodies and abnormal thyroid function, abnormal adrenal function with either hyper or hypocortisolism, hypogonadism, hypo or hyperglycemia and possibly impaired pituitary function. (13)

Most patients suffering from these side effects have a very clear onset of symptoms temporally related to a course of fluoroquinolone antibiotic. (13) They were often given the fluoroquinolone in conjunction with a corticosteroid or NSAID. Both of these classes of medications are associated with an increased incidence of adverse drug reaction from fluoroquinolones. (10,13)

As of yet no scientifically proven effective treatment is known, however patients will definitely benefit from your caring support and appropriate informed care. Of course, other diseases with similar symptoms need to be carefully ruled out.

There exists a large community of these patients who share information on the World Wide Web. Their numbers grow as the prescription of fluoroquinolones increases. Many of these patients are professionals like myself who have been affected by these drugs. Thank you for your time and consideration.

Todd R. Plumb MD

References:

  1. Cohen JS; Peripheral Neuropathy Associated With Fluoroquinolones
    Annals of Pharmacotherapy. 2001;35(12):1540-1547
  2. Francesca Lunzer Kritz; New Cipro, Same Side Effects, Washington Post, December 24, 2002.
  3. Shepard CW et al; Antimicrobial Postexposure Prophylaxis for Anthrax: Adverse Events and Adherence Emerging Infectious Diseases ¡E Vol. 8, No. 10, October 2002
  4. Fox EJ et al; The effects of ciprofloxacin and paclitaxel on metastatic and recurrent chondrosarcoma COMMUNITY ONCOLOGY ¡½ November/December 2005
  5. Physisicans Desk Referfence 2006
  6. de Bazignan DA etal; Psychiatric adverse effects of fluoroquinolone: review of cases from the French pharmacologic surveillance database[Article in French] Rev Med Interne. 2006 Jun;27(6):448-52. Epub 2006 Mar 9
  7. FDA Medical Bulletin * October 1996 * Volume 26 Number 3
    REPORTS OF ADVERSE EVENTS WITH FLUOROQUINOLONES
  8. Saint F. etal; Tendinopathy associated with fluoroquinolones: individuals at risk, incriminated physiopathologic mechanisms, therapeutic management [Article in French]
    Prog Urol. 2001 Dec;11(6):1331-4.

  9. De Sano A. etal; Adverse Reactions to Fluoroquinolones. An Overview on Mechanistic Aspects Current Medicinal Chemistry 2001, 8, 371-384 371
  10. Stahlmann R. etal; Effects of magnesium deficiency on joint cartilage in immature Beagle dogsimmunohistochemistry, electron microscopy, and mineral concentrations, Archives of Toxicology. Jan. 2000 73(11,12)
  11. Hayem G. Cytofluorometric analysis of chondrotoxicity of fluoroquinolone antimicrobial agents. Antimicrob Agents Chemother. 1994 Feb;38(2):243- 7.
  12. Kozie[lstrok]; Ciprofloxacin reduces mitochondrial potential and inhibits calcium entry into Jurkat cells
    R European Journal of Biochemistry 2003; 1 Supplement 1 July: Abstract number: P4.8-33., Zab[lstrok]ocki K., Szczepanowska
  13. http://health.groups.yahoo.com/group/quinolones/
  14. Simonin MA etal. Pefloxacin-Induced Achilles Tendon Toxicity in Rodents: Biochemical Changes in Proteoglycan Synthesis and Oxidative Damage to CollagenAntimicrobial Agents and Chemotherapy, April 2000, p. 867-872, Vol. 44, No. 4

Note to readers: The purpose of this E-Letter is solely informational and educational. The information herein should not be considered to be a substitute for the direct medical advice of your doctor, nor is it meant to encourage the diagnosis or treatment of any illness, disease, or other medical problem by laypersons. If you are under a physician’s care for any condition, he or she can advise you whether the information in this E-Letter is suitable for you. Readers should not make any changes in drugs, doses, or any other aspects of their medical treatment unless specifically directed to do so by their own doctors.

There are more updated links like the ones below here.

FDA November 4th, 2015

Suzy Cohen

Floxed

Musculoskeletal problems

​​Mitochondrial Dysfunction

Increased Oxidative Stress

NY Times

Forbes

DNA Adduction

2015  Fluoroquinolones, serious side effects

2015  Fluoroquinolones in drinking water

2015  Fluoroquinolones ubiquitous surface waters, waste waters

2015  FQs Ecotoxilogical effects aquatic organisms

2015  Fluoroquinolones and Corneal Fibroblast Motility

2015  Cipro and gluteal tendinopathy

2015  FQs and Neurological Toxicity

2015  FQs Increased Oxidative Stress

Kathy O’Donnell Kaufman put some documents together and continues to update.

 Some of the links are from www.pubmed.com. The FDA has not evaluated any of the information I put together. I, alone, am solely responsible for it.  Kathy.od (skype) kathy@criticalhealth.org.  It is as science based as I can make it with the assistance of scientists and health professionals.

I am in the U.S. where the environment is worse therefore more toxic and epigenetics are affected. Many MDs I know agree the most dangerous thing in America is an empty hospital bed.

How We Can Halt the Cipro_Levaquin Catastrophe

 


Digestive Disorders, Genetics and Epigenetics

Crohns_Ulcerative

 

Digestive Disorders….

Crohn’s disease has an energetic, or vibrational, underlying cause conditioned by mental and emotional patterns of thoughts and feeling-reactions that maintain an underlying condition of stress in the physical body. These underlying stress-producing energetic patterns keep the body in a fight or flight response mode.

Any treatment to bring about a “cure” of Crohn’s disease must necessarily include addressing this underlying energetic cause. Without this factor properly addressed and cleared, all treatments, medical and/or alternative, will only bring about relief and management of the condition.
Crohn’s disease is usually preceded by chronic indigestion. The cause of Crohn’s disease, diverticulitis, colitis and irritable bowel syndrome (IBS) is probably chronic indigestion.

Here is the definition of Crohn’s disease taken from the Mayo Clinic
“Crohn’s disease is a chronic inflammatory disease of the intestines. It primarily causes ulcerations (breaks in the lining) of the small intestines, but can affect the digestive system anywhere from the mouth to the anus. It is named after the physician who described the disease in 1932. It also is called granulomatous enteritis or colitis, regional enteritis, ileitis, or terminal ileitis.”

(Note: The Ileum is another name for the last section of the small intestines, the part that connects to the large intestines (or ascending colon), which is where the appendix is also located.)

To answer the question “What causes Crohn’s disease?” one must first answer the question “What causes inflammation in the intestines?” Right? So, let’s think this through by following the digestive process. But first let’s look at the inflammatory process.

The Cause of Inflammation
What causes inflammation is the immune system. It’s the body’s way of dealing with infection. Infection is the immune system’s way of dealing with foreign matter that is not being eliminated. Food is foreign matter to the body. It is supposed to be digested and then eliminated from the intestinal tract.  There are also genetic polymorphisms like TNF, IL6 and CRP that contribute to excessive inflammation. (While still controversial, studies of depression and IBD are currently being linked to TNF levels.)

Remember, the inside of the alimentary canal, from the mouth to the rectum, is outside the body, although it runs through it. In other words, it is part of the body’s immediate environment, just as dirt on your skin is external to the body. In fact, the lining of the intestines is made from the same matrix of tissue (ectoderm) as skin. It’s a membrane. In other words, it’s skin.

The brain and nervous system are also made from the same matrix, the ectoderm. Skin is an organ of elimination and has intelligence. It is a very permeable membrane, however, letting in what will nourish the body and eliminating what is toxic and not handled by the other organs and glands of elimination. The pH of the skin is a crucial aspect of its integrity. High acidity will break it down. Inflammation is created by the immune system, which is very pervasive throughout the intestines and colon, in order to deal with the foreign substance that is irritating the membrane.

It is literally a fire, a localized febrile condition created to burn up toxins and dying cells.

Food that is not properly digested will cause acidity in the intestines. Undigested protein will rot causing putrefaction. Undigested carbohydrates will ferment. Undigested fats will go rancid. Rancid fats destroy tissue immediately upon contact. This is why it is not good to eat rancid seeds and nuts or use rancid cooking and salad oils. They also destroy HDL, the so called “good” cholesterol. Cholesterol is essential to the structural composition of the cell wall . . . every one of the 100 trillion cells that make up your body.

Digestion of Proteins and Carbohydrates
Protein is broken down and digested in the stomach by hydrochloric acid (HCL). Hydrochloric acid is secreted by the parietal cells lining the stomach at a pH (potential of Hydrogen) of 0.8, very acidic, and by the time it mixes with the stomach contents its pH increases to about 2.5. Pepsin is the activating enzyme for HCL.e food during mastication – which is why it is important to chew food thoroughly before swallowing. Lypase is the activating enzyme for the digestion of fats.  Environmental factors like food transportation have reduced the enzymes in food that help us to digest that food.  Food is frequently picked before it is ripe.

HCL production in the stomach begins to decline around age 45, and our enzyme reserve runs low, so it is supportive of digestion to take digestive enzymes and probiotics.

Poor Digestion and Stress
The function of the parietal cells, like all cells in the body, depends largely upon adrenalin. Stress puts the body in fight or flight mode sending most of the adrenalin to the muscle cells.

The body is not interested in growth and healing when it is focused on survival or running away from a stressor, such as a charging bull, a stressful job or lifestyle, or long-term grieving and mental and emotional distress. Toxins inhaled or ingested bring on stress just as surely as any other external stressors. This is why cigarette smoking keeps the lining of the stomach inflamed, mainly from the chemicals (some 300 of them in the paper and tobacco).  Endocrine disruptors in the environment, like plug in chemical air fresheners contribute to stress. The genetic polymorphism MTHFR tends to contribute to a buildup of toxins. IBS, Crohns and Ulcerative Colitis are conditions associated with this genetic polymorphism.  MTHFR can also impact the creation of betaine in the methylation cycle.  Many people also have genetic mutations impacting their ability to digest carbohydrates  like ACE, PPARG, ADRB2, FABP2 and TCF7L2.

Fat genetic mutations will also be challenging for the digestive tract like FTO, LPL, FABP2, APOC3 and APOA2.

Poor nutrition puts the body cells in a state of starvation stress as well. When there’s stress, the parietal cells of the stomach shut down the production of hydrochloric acid, rendering protein digestion problematic. Mental and emotional stress also produces acidosis throughout the body.

When protein is not digested properly produces putrid matter. Putrefaction produces organic acids, which will erode the stomach and intestinal linings. The acids of putrefaction and fermentation are what cause “acid indigestion” and “heart burn.”

It is not the hydrochloric acid that causes these symptoms, including ulcers. In fact, it is the lack of hydrochloric acid that creates the condition of indigestion that leads to putrefaction of proteins. So when a person has “heart burn” after eating, while antacids do relieve the symptoms, they also cancel out the hydrochloric acid needed for digestion.

So when a person has “acid indigestion” and “heartburn” s/he needs some digestive support.

To take chemicals that stop the production of digestive stomach acids only adds insult to injury. We have to add digestive acids to the stomach not eliminate them. Pharmaceutical grade Aloe Juice for calming the digestive tract, antioxidants for healing it, Active B Complex (5-MTHF) to support MTHFR, digestive enzymes and probiotics are one of the solutions. IV or Isotonic delivery is important because the digestive tract is stressed. Isotonic delivery skips the whole process and goes right to the cells that need relief.  Isotonic Wellmune is also recommended as it contains patented beta-glucans that activate your innate immunity to better react to and neutralize foreign invaders of your body. It can also benefit the “depression”  associated with the genetic polymorphism TNF.

The Digestive Process and the pH Factor
The gallbladder and pancreas produce copious amounts of sodium-rich bile and alkaline juices respectively to emulsify fat and buffer the 2.5 pH acids of digestion in the chyme (stomach contents) coming out of the stomach into the duodenum, the first 12 inches of the small intestines. The intestines, which are ideally happy with a 5.8 to 6.2 pH, would be distressed and burned by 2.5 pH content.
So, it is important that the gallbladder and pancreas produce their alkaline substances to buffer this acid. Otherwise duodenal ulcers may develop. The colon, on the other hand, likes a more acidic environment – for one thing, to keep yeast and fungus from growing and thereby giving rise to infection.

What can cause these alkaline substances to be depleted of alkalizing sodium? Well, for one thing, over consumption of acid-producing foods – grains and proteins – which use a lot of acid-buffering sodium. What builds up sodium reserves? Vegetables, especially celery and cucumbers, and some fruits, such as prunes, plums and blueberries, are alkaline producing foods that build up your sodium reserves. These alkaline-producing foods should ideally make up 80% of our diet.

When bile loses it alkalinity, it becomes thick and therefore cannot easily flow through the small common-bile duct. Fat is not emulsified and therefore hardens to form stones. Calcium will precipitate out of solution and crystallize, creating calcium stones. When bile does not flow into the duodenum through the common-bile duct, the acid of the chyme does not get properly buffered and the fats are not emulsified. This creates an acid condition that will burn the small intestines, causing irritable bowel (IBS) and colitis.

Bacteria, viruses and other pathogens will thrive in this acid environment. This leads to inflammation and infection, the immune system’s way of dealing with pathogens. Crohn’s disease develops as the lining of the intestines begins to get raw, eaten up by these organic acids. This is why it will appear as “raw hamburger meat” in a colonoscopy. In this compromised condition, bacteria and viruses, along with undigested proteins and other toxins, easily enter the blood stream through the “leaky gut,” causing so-called “food allergies,” as well as infection throughout the body, including the kidneys and bladder, organs of elimination of toxic waste fluids.

Symptom Relief without side effects

Pharmaceutical grade Aloe Juice has anti-bacterial, anti-viral and anti-carcinogenic properties.  It calms and soothes skin, especially burning skin inside and out. Most Aloe product are not pharmaceutical grade so it is best to get the recommendation of a certified health professional. Antioxidants will repair cellular damage and scavenge free radicals. Isotonic delivery is recommended for optimal bioavailability.

5-MTHF (activated folate) will help the methylation cycle and DNA repair and functioning.  Digestive Enzymes and Probiotics will help digestion and boost and support good bacteria in the gut. Many health professionals have written books on how bad industrialized food is now.  We are seeing epidemics of digestive disorders in young people. This generation faces the worst toxic burden so far. GMOs have BT toxin injected into their DNA. Much more glyphosate is used on GMO food with surfactants (Roundup) that make it worse.  It is patented as an antibiotic therefore likely contributes to stronger toxic bacteria that are resistant.  The World Health Organization has classified glyphosate as a class 1 carcinogen. Organic food is recommended.  Eliminate endocrine disruptors from the environment as much as possible.

THE CURE

The “cure” of Crohn’s disease lies in the healing of the lining of the intestinal wall, factoring in genetics and epigenetics. It also includes treating and clearing the underlying energetic patterns of stress, as mentioned at the start of this article.

Emotional Factors

In her wonderful and popular book, “You Can Heal Your Life,” Louise Hay suggests that behind inflammation in the colon (ileitis), which is whiat Crohns is, may be a deep sense of fear and worry of not being “good enough.” This deeply rooted pattern was likely put there early in childhood by a well-meaning parent who tried to motivate a child by telling her how stupid she is, screaming and berating her for not being able to do anything right.

A new thought pattern she offers could be: “I love and approve of myself. I am doing the best I can. I am wonderful. I am at peace.”

Genetics

This infographic identifies all of the genetic variants named in this article. It is a snapshot of the 45 genetic polymorphisms that each have 3 independent clinical studies showing a change in expression with a change in lifestyle. The company does not sell DNA to pharmaceutical companies. These are my results.  Notice I have a very high sensitivity to carbohydrates and medium sensitivity to fats.  I knew that from my experience but I did not know I had genetics that put me at risk for Celiac Disease.  The B vitamin snapshot shows I have MTHFR. I have used all the protocols I describe.  Other symptoms of mine that have disappeared are allergies, sinus headaches, night terrors, IBS and heart palpitations.  Notice I also have a need for extra Omega III and Vitamin D as well as cruciferous and alium vegetables.  (Curcumin in the form of BCM-95 with tumeric and added broccoli concentrate can also benefit in a pinch if you can’t get your 6-12 servings of vegetables in.  That is tough for anyone working full time. To have quality food you darn near have to grow your own.  Add  in lack of nutrients in the soil, premature harvesting, pesticides, methyl mercury fallout from burning coal, pharmaceutical contamination of water, compromised environmental policies by moneyed corporate interests controlling politics, etc. can we really expect to achieve optimal health just from eating food?)

DNAFIT

This article took me 12 years to write.  It is compiled from many cutting edge professionals, one of the top genetic scientists in the world, Dr. Keith Grimaldi, my work with cutting edge Allopathic health professionals and CAMs, and my own urgency to help someone I love deeply.  There is plenty of science to back all of it up.  I learned by Googling, Pubmed, science based sites, scientists and health professionals who have success. We all need science but none of us should have to wait the years it will take for clinical studies and medical schools to catch up, especially when the protocols are benign and effective and there are pharmaceutical and insurance moneyed interests blocking many progressive moves toward prevention and optimal health.  To learn more in detail about protocols go to my youtube channel, Kathy Kaufman Videos.  Write me at kathy@criticalhealth.org.

A special thanks to my friend Michael Sweringen of Microleadership.  He helped lead me to all of the climate and environmental information that got me thinking about epigenetics.  And Dr. Keith Grimaldi, a brilliant genetic scientist and good man.

And lastly, the FDA has not evaluated any of this information. If only they would.